Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Gm11643-201ENSMUST00000119578 864 ntBASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn3Q9ES97 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn3Q9ES97 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn3Q9ES97 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn3Q9ES97 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn3Q9ES97 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn3Q9ES97 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtn3Q9ES97 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn3Q9ES97 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Gm13836-201ENSMUST00000121159 501 ntBASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn3Q9ES97 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rtn3Q9ES97 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms