Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ube3bQ9ES34 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Gm37722-201ENSMUST00000193757 208 ntBASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube3bQ9ES34 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.27■□□□□ 0.84
Ube3bQ9ES34 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ube3bQ9ES34 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ube3bQ9ES34 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ube3bQ9ES34 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ube3bQ9ES34 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Ube3bQ9ES34 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.26■□□□□ 0.83
Ube3bQ9ES34 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Phf7-203ENSMUST00000226565 1971 ntBASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube3bQ9ES34 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube3bQ9ES34 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms