Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Gm26833-201ENSMUST00000180899 440 ntBASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr3Q9DCF9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Gm13146-201ENSMUST00000118508 780 ntBASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr3Q9DCF9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Gm29791-202ENSMUST00000207888 369 ntBASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ssr3Q9DCF9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ssr3Q9DCF9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssr3Q9DCF9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms