Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp2aQ9DB34 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2aQ9DB34 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm11539-201ENSMUST00000119837 557 ntBASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm13436-201ENSMUST00000120418 567 ntBASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2aQ9DB34 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Gm37025-201ENSMUST00000195159 829 ntBASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Gm8969-201ENSMUST00000199694 526 ntBASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Gm43799-201ENSMUST00000201845 579 ntBASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Gm7791-201ENSMUST00000219066 539 ntBASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2aQ9DB34 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2aQ9DB34 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2aQ9DB34 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms