Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.7■□□□□ 0.58
Rsph3bQ9DA80 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Gm9013-201ENSMUST00000132939 882 ntBASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Gm5587-201ENSMUST00000206270 674 ntBASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.69■□□□□ 0.58
Rsph3bQ9DA80 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Gm26039-201ENSMUST00000158152 144 ntBASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Gm10566-201ENSMUST00000086739 996 ntBASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rsph3bQ9DA80 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Gm11355-201ENSMUST00000121120 306 ntBASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Gm7284-201ENSMUST00000131667 944 ntBASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rsph3bQ9DA80 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rsph3bQ9DA80 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rsph3bQ9DA80 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rsph3bQ9DA80 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rsph3bQ9DA80 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rsph3bQ9DA80 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rsph3bQ9DA80 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rsph3bQ9DA80 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms