Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap53Q9D439 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gm12085-201ENSMUST00000119263 940 ntBASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Timm23-208ENSMUST00000226683 750 ntBASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap53Q9D439 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap53Q9D439 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Gm715-201ENSMUST00000117865 831 ntBASIC18.68■□□□□ 0.58
Cfap53Q9D439 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.68■□□□□ 0.58
Cfap53Q9D439 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap53Q9D439 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap53Q9D439 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.66■□□□□ 0.58
Cfap53Q9D439 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms