Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Upk1aQ9D132 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Upk1aQ9D132 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.16■□□□□ 0.18
Upk1aQ9D132 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk1aQ9D132 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.15■□□□□ 0.18
Upk1aQ9D132 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.15■□□□□ 0.18
Upk1aQ9D132 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.15■□□□□ 0.18
Upk1aQ9D132 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk1aQ9D132 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms