Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Mir5130-201ENSMUST00000175160 84 ntBASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Gm45058-201ENSMUST00000205810 766 ntBASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssbp3Q9D032 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Ssbp3Q9D032 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssbp3Q9D032 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssbp3Q9D032 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ssbp3Q9D032 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssbp3Q9D032 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Gm16061-201ENSMUST00000122167 857 ntBASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Gm17661-201ENSMUST00000170317 270 ntBASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Il3ra-202ENSMUST00000223589 738 ntBASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.19□□□□□ -0.14
Ssbp3Q9D032 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssbp3Q9D032 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssbp3Q9D032 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms