Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Gm10849-201ENSMUST00000100397 618 ntBASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim13Q9CYB0 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Gm10418-201ENSMUST00000100943 576 ntBASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Gm26571-201ENSMUST00000181399 666 ntBASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim13Q9CYB0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Gm18671-201ENSMUST00000214826 683 ntBASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim13Q9CYB0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim13Q9CYB0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms