Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.51■□□□□ 0.55
Ssr1Q9CY50 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ssr1Q9CY50 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Gm13401-201ENSMUST00000117074 291 ntBASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Ssr1Q9CY50 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ssr1Q9CY50 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssr1Q9CY50 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ssr1Q9CY50 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Mir8112-201ENSMUST00000184382 131 ntBASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Gm10138-203ENSMUST00000206952 366 ntBASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms