Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc3Q9CW03 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Smc3Q9CW03 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Gm4974-201ENSMUST00000209974 875 ntBASIC20.05■□□□□ 0.8
Smc3Q9CW03 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc3Q9CW03 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Gm37292-201ENSMUST00000192062 758 ntBASIC20.04■□□□□ 0.8
Smc3Q9CW03 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc3Q9CW03 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm13216-201ENSMUST00000117145 591 ntBASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm12382-201ENSMUST00000122005 922 ntBASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gm20049-201ENSMUST00000219950 730 ntBASIC20.03■□□□□ 0.8
Smc3Q9CW03 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc3Q9CW03 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc3Q9CW03 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc3Q9CW03 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Smc3Q9CW03 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc3Q9CW03 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Gm10517-202ENSMUST00000192970 758 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms