Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msantd3Q9CR78 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msantd3Q9CR78 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msantd3Q9CR78 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msantd3Q9CR78 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msantd3Q9CR78 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Msantd3Q9CR78 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Msantd3Q9CR78 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Gm7153-201ENSMUST00000117092 455 ntBASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Gm28033-201ENSMUST00000184224 96 ntBASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msantd3Q9CR78 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msantd3Q9CR78 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msantd3Q9CR78 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Actl10-202ENSMUST00000226583 1501 ntBASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msantd3Q9CR78 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms