Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Gm27867-201ENSMUST00000184778 125 ntBASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldnd1Q9CQX5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldnd1Q9CQX5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Gm13312-201ENSMUST00000119631 718 ntBASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Gm5364-201ENSMUST00000216789 889 ntBASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldnd1Q9CQX5 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44357-201ENSMUST00000195897 142 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm19658-201ENSMUST00000196231 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44367-201ENSMUST00000196836 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44350-201ENSMUST00000197197 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44390-201ENSMUST00000197533 144 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44313-201ENSMUST00000198018 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44486-201ENSMUST00000198508 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44314-201ENSMUST00000199263 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44394-201ENSMUST00000199558 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44484-201ENSMUST00000199873 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44466-201ENSMUST00000200264 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm44359-201ENSMUST00000200671 138 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Gm10060-201ENSMUST00000212002 111 ntBASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldnd1Q9CQX5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms