Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Raf1Q99N57 Gm2559-201ENSMUST00000201323 363 ntBASIC15.32■□□□□ 0.04
Raf1Q99N57 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.32■□□□□ 0.04
Raf1Q99N57 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Raf1Q99N57 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raf1Q99N57 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Raf1Q99N57 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raf1Q99N57 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Gm5643-201ENSMUST00000117081 966 ntBASIC15.3■□□□□ 0.04
Raf1Q99N57 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Gm38285-201ENSMUST00000192928 922 ntBASIC15.3■□□□□ 0.04
Raf1Q99N57 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.3■□□□□ 0.04
Raf1Q99N57 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.3■□□□□ 0.04
Raf1Q99N57 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raf1Q99N57 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raf1Q99N57 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Raf1Q99N57 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.29■□□□□ 0.04
Raf1Q99N57 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.29■□□□□ 0.04
Raf1Q99N57 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.29■□□□□ 0.04
Raf1Q99N57 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Raf1Q99N57 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Raf1Q99N57 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Raf1Q99N57 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raf1Q99N57 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
Raf1Q99N57 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Raf1Q99N57 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Raf1Q99N57 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Raf1Q99N57 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raf1Q99N57 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raf1Q99N57 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms