Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha9Q91Y11 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha9Q91Y11 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Gm16061-201ENSMUST00000122167 857 ntBASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Gm13474-201ENSMUST00000122466 815 ntBASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha9Q91Y11 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Gm6433-201ENSMUST00000118634 875 ntBASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha9Q91Y11 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Gm7889-201ENSMUST00000185591 958 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Gm7370-201ENSMUST00000219471 767 ntBASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha9Q91Y11 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha9Q91Y11 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms