Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Gm12527-201ENSMUST00000117967 564 ntBASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Gm42545-201ENSMUST00000202755 922 ntBASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Gm18025-201ENSMUST00000221733 862 ntBASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb4Q91XZ6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb4Q91XZ6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb4Q91XZ6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb4Q91XZ6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb4Q91XZ6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Gm37856-201ENSMUST00000191634 999 ntBASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb4Q91XZ6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb4Q91XZ6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Trmt13-210ENSMUST00000198454 880 ntBASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb4Q91XZ6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms