Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga6Q91XY2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga6Q91XY2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhga6Q91XY2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga6Q91XY2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga6Q91XY2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga6Q91XY2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms