Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44357-201ENSMUST00000195897 142 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm19658-201ENSMUST00000196231 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44367-201ENSMUST00000196836 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44350-201ENSMUST00000197197 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44390-201ENSMUST00000197533 144 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44313-201ENSMUST00000198018 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44486-201ENSMUST00000198508 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44454-201ENSMUST00000198541 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44314-201ENSMUST00000199263 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44394-201ENSMUST00000199558 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44484-201ENSMUST00000199873 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44466-201ENSMUST00000200264 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Gm44359-201ENSMUST00000200671 138 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Idnk-204ENSMUST00000226010 1898 ntBASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.64□□□□□ -0.07
Cspg4Q8VHY0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.63□□□□□ -0.07
Cspg4Q8VHY0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cspg4Q8VHY0 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Gm10060-201ENSMUST00000212002 111 ntBASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cspg4Q8VHY0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms