Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Gm8495-201ENSMUST00000188740 694 ntBASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpa1Q8VEE4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpa1Q8VEE4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpa1Q8VEE4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpa1Q8VEE4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpa1Q8VEE4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms