Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lmcd1Q8VEE1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lmcd1Q8VEE1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Gm15165-201ENSMUST00000118140 502 ntBASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Lmcd1Q8VEE1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Gm13186-201ENSMUST00000118031 316 ntBASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lmcd1Q8VEE1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.1■□□□□ 0.49
Lmcd1Q8VEE1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms