Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacnb1Q8R3Z5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacnb1Q8R3Z5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Gm42438-201ENSMUST00000197832 974 ntBASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacnb1Q8R3Z5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Gm11834-201ENSMUST00000122257 585 ntBASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Gm42619-201ENSMUST00000197564 1136 ntBASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacnb1Q8R3Z5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cacnb1Q8R3Z5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacnb1Q8R3Z5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cacnb1Q8R3Z5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Gm24841-201ENSMUST00000158676 357 ntBASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacnb1Q8R3Z5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms