Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slf1Q8R3P9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slf1Q8R3P9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
Slf1Q8R3P9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slf1Q8R3P9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slf1Q8R3P9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slf1Q8R3P9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slf1Q8R3P9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slf1Q8R3P9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slf1Q8R3P9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Gm15039-201ENSMUST00000118914 875 ntBASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.22■□□□□ 0.35
Slf1Q8R3P9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms