Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Treml1Q8K558 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Treml1Q8K558 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Treml1Q8K558 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Treml1Q8K558 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
Treml1Q8K558 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Treml1Q8K558 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Treml1Q8K558 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.82■□□□□ 0.28
Treml1Q8K558 Gm9731-201ENSMUST00000209480 747 ntBASIC16.82■□□□□ 0.28
Treml1Q8K558 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.82■□□□□ 0.28
Treml1Q8K558 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml1Q8K558 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Treml1Q8K558 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Gm7889-201ENSMUST00000185591 958 ntBASIC16.81■□□□□ 0.28
Treml1Q8K558 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Treml1Q8K558 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml1Q8K558 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Treml1Q8K558 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Treml1Q8K558 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml1Q8K558 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Gm17661-201ENSMUST00000170317 270 ntBASIC16.79■□□□□ 0.28
Treml1Q8K558 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Treml1Q8K558 Gm27463-201ENSMUST00000183569 57 ntBASIC16.79■□□□□ 0.28
Treml1Q8K558 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.79■□□□□ 0.28
Treml1Q8K558 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml1Q8K558 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Treml1Q8K558 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.78■□□□□ 0.28
Treml1Q8K558 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Treml1Q8K558 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.78■□□□□ 0.28
Treml1Q8K558 Gm9987-201ENSMUST00000069768 567 ntBASIC16.78■□□□□ 0.28
Treml1Q8K558 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms