Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Gm15565-201ENSMUST00000118890 427 ntBASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn1Q8K0T0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn1Q8K0T0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Gm18958-201ENSMUST00000174258 762 ntBASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rtn1Q8K0T0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn1Q8K0T0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn1Q8K0T0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rtn1Q8K0T0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rtn1Q8K0T0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rtn1Q8K0T0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.64■□□□□ 0.74
Rtn1Q8K0T0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms