Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.29■□□□□ 0.2
Hmgcs1Q8JZK9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgcs1Q8JZK9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgcs1Q8JZK9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgcs1Q8JZK9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgcs1Q8JZK9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgcs1Q8JZK9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms