Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2bQ8CFI7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Polr2bQ8CFI7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Gm45058-201ENSMUST00000205810 766 ntBASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Polr2bQ8CFI7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Polr2bQ8CFI7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Mir5130-201ENSMUST00000175160 84 ntBASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Polr2bQ8CFI7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Gm7370-201ENSMUST00000219471 767 ntBASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Polr2bQ8CFI7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Polr2bQ8CFI7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Polr2bQ8CFI7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.27■□□□□ 0.52
Polr2bQ8CFI7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Polr2bQ8CFI7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms