Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Q8CD60 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.93■□□□□ 0.46
Q8CD60 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q8CD60 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8CD60 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Q8CD60 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Q8CD60 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.92■□□□□ 0.46
Q8CD60 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.92■□□□□ 0.46
Q8CD60 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Q8CD60 Gm43799-201ENSMUST00000201845 579 ntBASIC17.92■□□□□ 0.46
Q8CD60 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Q8CD60 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.92■□□□□ 0.46
Q8CD60 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8CD60 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q8CD60 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Gm13559-201ENSMUST00000120476 863 ntBASIC17.91■□□□□ 0.46
Q8CD60 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Q8CD60 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q8CD60 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Q8CD60 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Q8CD60 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8CD60 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Q8CD60 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Q8CD60 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Q8CD60 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8CD60 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Q8CD60 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Q8CD60 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.89■□□□□ 0.45
Q8CD60 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.89■□□□□ 0.45
Q8CD60 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.89■□□□□ 0.45
Q8CD60 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8CD60 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8CD60 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8CD60 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Q8CD60 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms