Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx1Q8C8B0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Alx1Q8C8B0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.89■□□□□ 0.78
Alx1Q8C8B0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Alx1Q8C8B0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Alx1Q8C8B0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Phf7-203ENSMUST00000226565 1971 ntBASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx1Q8C8B0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx1Q8C8B0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Alx1Q8C8B0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx1Q8C8B0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms