Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Gm25911-201ENSMUST00000157621 56 ntBASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap54Q8C6S9 Gm12644-201ENSMUST00000119935 606 ntBASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm8000-201ENSMUST00000188378 592 ntBASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap54Q8C6S9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap54Q8C6S9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Psmb5-202ENSMUST00000227257 622 ntBASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap54Q8C6S9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap54Q8C6S9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Gm2756-201ENSMUST00000195851 400 ntBASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap54Q8C6S9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms