Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf428Q8C1M2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Phf7-203ENSMUST00000226565 1971 ntBASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf428Q8C1M2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Gm12350-201ENSMUST00000121208 462 ntBASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf428Q8C1M2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Znf428Q8C1M2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Znf428Q8C1M2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.33■□□□□ 0.84
Znf428Q8C1M2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Znf428Q8C1M2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.33■□□□□ 0.84
Znf428Q8C1M2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.33■□□□□ 0.84
Znf428Q8C1M2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Gm6736-201ENSMUST00000166583 948 ntBASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Znf428Q8C1M2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf428Q8C1M2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Znf428Q8C1M2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Znf428Q8C1M2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Znf428Q8C1M2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Znf428Q8C1M2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms