Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm6376-201ENSMUST00000209407 580 ntBASIC22.98■■□□□ 1.27
Cps1Q8C196 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC22.98■■□□□ 1.27
Cps1Q8C196 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC22.97■■□□□ 1.27
Cps1Q8C196 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
Cps1Q8C196 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC22.97■■□□□ 1.27
Cps1Q8C196 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cps1Q8C196 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Cps1Q8C196 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Gm25990-201ENSMUST00000102440 86 ntBASIC22.96■■□□□ 1.27
Cps1Q8C196 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cps1Q8C196 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Cps1Q8C196 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cps1Q8C196 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cps1Q8C196 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Cps1Q8C196 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cps1Q8C196 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cps1Q8C196 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC22.94■■□□□ 1.26
Cps1Q8C196 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC22.94■■□□□ 1.26
Cps1Q8C196 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cps1Q8C196 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Gm11779-201ENSMUST00000118541 368 ntBASIC22.93■■□□□ 1.26
Cps1Q8C196 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Cps1Q8C196 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cps1Q8C196 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cps1Q8C196 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Cps1Q8C196 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Cps1Q8C196 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Gm15442-201ENSMUST00000117905 1527 ntBASIC22.92■■□□□ 1.26
Cps1Q8C196 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.92■■□□□ 1.26
Cps1Q8C196 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Gm7230-201ENSMUST00000173026 815 ntBASIC22.92■■□□□ 1.26
Cps1Q8C196 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.92■■□□□ 1.26
Cps1Q8C196 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cps1Q8C196 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Cps1Q8C196 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Cps1Q8C196 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC22.91■■□□□ 1.26
Cps1Q8C196 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Cps1Q8C196 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cps1Q8C196 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cps1Q8C196 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cps1Q8C196 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Cps1Q8C196 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Cps1Q8C196 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cps1Q8C196 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC22.9■■□□□ 1.26
Cps1Q8C196 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cps1Q8C196 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC22.9■■□□□ 1.26
Cps1Q8C196 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC22.9■■□□□ 1.26
Cps1Q8C196 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms