Protein–RNA interactions for Protein: Q8C0S4

Ttc21a, Tetratricopeptide repeat protein 21A, mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc21aQ8C0S4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc21aQ8C0S4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc21aQ8C0S4 Gm22697-201ENSMUST00000175194 63 ntBASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc21aQ8C0S4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc21aQ8C0S4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc21aQ8C0S4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc21aQ8C0S4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Gm18101-201ENSMUST00000215769 548 ntBASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Gm21559-201ENSMUST00000220638 855 ntBASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Gm8587-201ENSMUST00000076538 843 ntBASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc21aQ8C0S4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Ttc21aQ8C0S4 Phf7-203ENSMUST00000226565 1971 ntBASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Gm10013-201ENSMUST00000106074 672 ntBASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Gm26039-201ENSMUST00000158152 144 ntBASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc21aQ8C0S4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc21aQ8C0S4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms