Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcaf1Q8BNE1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Gm6659-201ENSMUST00000174752 547 ntBASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcaf1Q8BNE1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tcaf1Q8BNE1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Gm8587-201ENSMUST00000076538 843 ntBASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.39■□□□□ 0.53
Tcaf1Q8BNE1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tcaf1Q8BNE1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.37■□□□□ 0.53
Tcaf1Q8BNE1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tcaf1Q8BNE1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tcaf1Q8BNE1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms