Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.25■□□□□ 0.19
Prpf18Q8BM39 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Gm37179-201ENSMUST00000194862 823 ntBASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf18Q8BM39 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf18Q8BM39 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Gm6211-202ENSMUST00000167849 925 ntBASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf18Q8BM39 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms