Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col16a1Q8BLX7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col16a1Q8BLX7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Col16a1Q8BLX7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC22.39■■□□□ 1.17
Col16a1Q8BLX7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col16a1Q8BLX7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Gm27867-201ENSMUST00000184778 125 ntBASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Gm43332-201ENSMUST00000202511 1044 ntBASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col16a1Q8BLX7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.37■■□□□ 1.17
Col16a1Q8BLX7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col16a1Q8BLX7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Col16a1Q8BLX7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC22.37■■□□□ 1.17
Col16a1Q8BLX7 Gm13830-205ENSMUST00000201195 1155 ntBASIC22.37■■□□□ 1.17
Col16a1Q8BLX7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Mir5126-201ENSMUST00000175513 77 ntBASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Gm6376-201ENSMUST00000209407 580 ntBASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Gm10060-201ENSMUST00000212002 111 ntBASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col16a1Q8BLX7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col16a1Q8BLX7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Gm15165-201ENSMUST00000118140 502 ntBASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Gm11779-201ENSMUST00000118541 368 ntBASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col16a1Q8BLX7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Gm32996-201ENSMUST00000199828 1447 ntBASIC22.33■■□□□ 1.17
Col16a1Q8BLX7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Gm11594-201ENSMUST00000122313 162 ntBASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Gm8000-201ENSMUST00000188378 592 ntBASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col16a1Q8BLX7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms