Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Csnk1a1Q8BK63 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Gm38027-201ENSMUST00000192315 235 ntBASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Csnk1a1Q8BK63 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Csnk1a1Q8BK63 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Csnk1a1Q8BK63 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gm17661-201ENSMUST00000170317 270 ntBASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Odf3b-204ENSMUST00000227834 930 ntBASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Csnk1a1Q8BK63 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms