Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nop53Q8BK35 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Gm15375-201ENSMUST00000119510 849 ntBASIC18.3■□□□□ 0.52
Nop53Q8BK35 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Dio3-201ENSMUST00000097228 1449 ntBASIC18.3■□□□□ 0.52
Nop53Q8BK35 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.3■□□□□ 0.52
Nop53Q8BK35 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nop53Q8BK35 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.29■□□□□ 0.52
Nop53Q8BK35 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.29■□□□□ 0.52
Nop53Q8BK35 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Gm12896-201ENSMUST00000118430 226 ntBASIC18.28■□□□□ 0.52
Nop53Q8BK35 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.28■□□□□ 0.52
Nop53Q8BK35 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Nop53Q8BK35 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nop53Q8BK35 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Gm27275-201ENSMUST00000184318 272 ntBASIC18.27■□□□□ 0.52
Nop53Q8BK35 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nop53Q8BK35 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.27■□□□□ 0.51
Nop53Q8BK35 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Gm6576-201ENSMUST00000169678 883 ntBASIC18.26■□□□□ 0.51
Nop53Q8BK35 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nop53Q8BK35 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.25■□□□□ 0.51
Nop53Q8BK35 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nop53Q8BK35 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms