Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx42Q810A7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.34■□□□□ 0.37
Ddx42Q810A7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx42Q810A7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx42Q810A7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx42Q810A7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx42Q810A7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx42Q810A7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.33■□□□□ 0.36
Ddx42Q810A7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.33■□□□□ 0.36
Ddx42Q810A7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.33■□□□□ 0.36
Ddx42Q810A7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx42Q810A7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.32■□□□□ 0.36
Ddx42Q810A7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Mir7071-201ENSMUST00000184847 69 ntBASIC17.32■□□□□ 0.36
Ddx42Q810A7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.32■□□□□ 0.36
Ddx42Q810A7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx42Q810A7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx42Q810A7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx42Q810A7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.29■□□□□ 0.36
Ddx42Q810A7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx42Q810A7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx42Q810A7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms