Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Gm26524-201ENSMUST00000192339 390 ntBASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Rab3c-203ENSMUST00000224180 967 ntBASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk3bQ80YF6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk3bQ80YF6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3bQ80YF6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Gm10138-203ENSMUST00000206952 366 ntBASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Mtag2-201ENSMUST00000058665 714 ntBASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3bQ80YF6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3bQ80YF6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms