Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf40bQ80W14 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf40bQ80W14 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf40bQ80W14 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf40bQ80W14 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Gm7638-201ENSMUST00000121348 967 ntBASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf40bQ80W14 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf40bQ80W14 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Gm11950-201ENSMUST00000121615 838 ntBASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Gm27357-201ENSMUST00000183754 135 ntBASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf40bQ80W14 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Gm11355-201ENSMUST00000121120 306 ntBASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf40bQ80W14 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Gm7213-201ENSMUST00000215977 950 ntBASIC19.6■□□□□ 0.73
Prpf40bQ80W14 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf40bQ80W14 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms