Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Otop1Q80VM9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.36■□□□□ 0.21
Otop1Q80VM9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Gm34391-201ENSMUST00000203706 907 ntBASIC16.36■□□□□ 0.21
Otop1Q80VM9 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.36■□□□□ 0.21
Otop1Q80VM9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Otop1Q80VM9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.35■□□□□ 0.21
Otop1Q80VM9 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.35■□□□□ 0.21
Otop1Q80VM9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Gm28659-201ENSMUST00000188013 759 ntBASIC16.35■□□□□ 0.21
Otop1Q80VM9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Otop1Q80VM9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Otop1Q80VM9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.34■□□□□ 0.21
Otop1Q80VM9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Otop1Q80VM9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Birc2-201ENSMUST00000054878 378 ntBASIC16.33■□□□□ 0.2
Otop1Q80VM9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.33■□□□□ 0.2
Otop1Q80VM9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Otop1Q80VM9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Otop1Q80VM9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Otop1Q80VM9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.32■□□□□ 0.2
Otop1Q80VM9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.32■□□□□ 0.2
Otop1Q80VM9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms