Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC26.44■■□□□ 1.82
Rpap1Q80TE0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap1Q80TE0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Rprl3-201ENSMUST00000157400 290 ntBASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Gm6376-201ENSMUST00000209407 580 ntBASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rpap1Q80TE0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC26.41■■□□□ 1.82
Rpap1Q80TE0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC26.41■■□□□ 1.82
Rpap1Q80TE0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rpap1Q80TE0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Rpap1Q80TE0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
Rpap1Q80TE0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap1Q80TE0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC26.39■■□□□ 1.82
Rpap1Q80TE0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC26.39■■□□□ 1.82
Rpap1Q80TE0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rpap1Q80TE0 Zfp264-201ENSMUST00000208656 1563 ntBASIC26.39■■□□□ 1.82
Rpap1Q80TE0 Gm5828-201ENSMUST00000071842 1860 ntBASIC26.39■■□□□ 1.82
Rpap1Q80TE0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rpap1Q80TE0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
Rpap1Q80TE0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Gm12350-201ENSMUST00000121208 462 ntBASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Gm11594-201ENSMUST00000122313 162 ntBASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap1Q80TE0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Gm15165-201ENSMUST00000118140 502 ntBASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap1Q80TE0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap1Q80TE0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms