Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf38bQ80SY5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Gm17808-201ENSMUST00000200859 894 ntBASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38bQ80SY5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Prpf38bQ80SY5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38bQ80SY5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38bQ80SY5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38bQ80SY5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38bQ80SY5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38bQ80SY5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Gm12085-201ENSMUST00000119263 940 ntBASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38bQ80SY5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38bQ80SY5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Prpf38bQ80SY5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms