Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Gm18032-201ENSMUST00000222541 538 ntBASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc44a1Q6X893 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc44a1Q6X893 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc44a1Q6X893 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Gm13836-201ENSMUST00000121159 501 ntBASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc44a1Q6X893 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc44a1Q6X893 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Gm10566-201ENSMUST00000086739 996 ntBASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc44a1Q6X893 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Slc44a1Q6X893 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms