Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Timm23-208ENSMUST00000226683 750 ntBASIC16.19■□□□□ 0.18
Trim45Q6PFY8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim45Q6PFY8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.18■□□□□ 0.18
Trim45Q6PFY8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim45Q6PFY8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim45Q6PFY8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim45Q6PFY8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim45Q6PFY8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms