Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Gm12644-201ENSMUST00000119935 606 ntBASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tra2aQ6PFR5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Iqck-206ENSMUST00000208658 2891 ntBASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tra2aQ6PFR5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.58■□□□□ 0.25
Tra2aQ6PFR5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.58■□□□□ 0.25
Tra2aQ6PFR5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tra2aQ6PFR5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tra2aQ6PFR5 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Tra2aQ6PFR5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tra2aQ6PFR5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Gm44430-201ENSMUST00000203376 995 ntBASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.56■□□□□ 0.24
Tra2aQ6PFR5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms