Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Snrnp40Q6PE01 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Gm12644-201ENSMUST00000119935 606 ntBASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Gm27525-201ENSMUST00000184465 107 ntBASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Snrnp40Q6PE01 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Snrnp40Q6PE01 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Snrnp40Q6PE01 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Snrnp40Q6PE01 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Snrnp40Q6PE01 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Snrnp40Q6PE01 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Snrnp40Q6PE01 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Rps4l-201ENSMUST00000071745 943 ntBASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Snrnp40Q6PE01 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms