Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf220Q6PDX6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Reep4-203ENSMUST00000226563 1444 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Gm9988-201ENSMUST00000069786 435 ntBASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf220Q6PDX6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf220Q6PDX6 Tgds-204ENSMUST00000228543 1594 ntBASIC16.21■□□□□ 0.18
Rnf220Q6PDX6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf220Q6PDX6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf220Q6PDX6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf220Q6PDX6 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf220Q6PDX6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf220Q6PDX6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf220Q6PDX6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf220Q6PDX6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf220Q6PDX6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf220Q6PDX6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf220Q6PDX6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms