Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.57■□□□□ 0.4
Krt42Q6IFX2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt42Q6IFX2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt42Q6IFX2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Gm42778-201ENSMUST00000199644 553 ntBASIC17.54■□□□□ 0.4
Krt42Q6IFX2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.54■□□□□ 0.4
Krt42Q6IFX2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt42Q6IFX2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt42Q6IFX2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms