Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a2Q64739 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Col11a2Q64739 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Col11a2Q64739 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Col11a2Q64739 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.69■□□□□ 0.9
Col11a2Q64739 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Gm14140-201ENSMUST00000119999 995 ntBASIC20.69■□□□□ 0.9
Col11a2Q64739 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.69■□□□□ 0.9
Col11a2Q64739 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a2Q64739 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a2Q64739 Gm25911-201ENSMUST00000157621 56 ntBASIC20.68■□□□□ 0.9
Col11a2Q64739 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a2Q64739 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.68■□□□□ 0.9
Col11a2Q64739 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col11a2Q64739 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a2Q64739 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a2Q64739 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.67■□□□□ 0.9
Col11a2Q64739 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.67■□□□□ 0.9
Col11a2Q64739 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm13036-201ENSMUST00000117799 748 ntBASIC20.67■□□□□ 0.9
Col11a2Q64739 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col11a2Q64739 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm4535-201ENSMUST00000182274 558 ntBASIC20.67■□□□□ 0.9
Col11a2Q64739 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm7063-201ENSMUST00000186840 981 ntBASIC20.67■□□□□ 0.9
Col11a2Q64739 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm10175-201ENSMUST00000086013 645 ntBASIC20.67■□□□□ 0.9
Col11a2Q64739 Gm10355-201ENSMUST00000097146 517 ntBASIC20.67■□□□□ 0.9
Col11a2Q64739 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a2Q64739 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col11a2Q64739 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col11a2Q64739 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.66■□□□□ 0.9
Col11a2Q64739 Gm6736-201ENSMUST00000166583 948 ntBASIC20.66■□□□□ 0.9
Col11a2Q64739 Gm25745-201ENSMUST00000174945 133 ntBASIC20.66■□□□□ 0.9
Col11a2Q64739 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.66■□□□□ 0.9
Col11a2Q64739 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col11a2Q64739 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Gm13418-201ENSMUST00000119097 944 ntBASIC20.65■□□□□ 0.9
Col11a2Q64739 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Gm6550-201ENSMUST00000187574 993 ntBASIC20.65■□□□□ 0.9
Col11a2Q64739 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.65■□□□□ 0.9
Col11a2Q64739 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col11a2Q64739 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col11a2Q64739 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Col11a2Q64739 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.64■□□□□ 0.9
Col11a2Q64739 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.64■□□□□ 0.9
Col11a2Q64739 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col11a2Q64739 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col11a2Q64739 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Col11a2Q64739 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col11a2Q64739 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col11a2Q64739 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col11a2Q64739 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col11a2Q64739 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col11a2Q64739 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.64■□□□□ 0.89
Col11a2Q64739 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Col11a2Q64739 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.64■□□□□ 0.89
Col11a2Q64739 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.64■□□□□ 0.89
Col11a2Q64739 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.64■□□□□ 0.89
Col11a2Q64739 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.64■□□□□ 0.89
Col11a2Q64739 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.63■□□□□ 0.89
Col11a2Q64739 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms